1. Brew Conda Not Found
2. Brew Miniconda
3. Mac Install Miniconda

The Missing Package Manager for macOS (or Linux). It’s all Git and Ruby underneath, so hack away with the knowledge that you can easily revert your modifications and merge upstream updates. Pip, and Jupyter installation. Use brew to install conda, run below command. Python -m ipykernel. I came across the 'brew install' solution too but while installing Homebrew before running this comand, Homebrew asked for changing the permissions on certain system folders. You want to deactivate conda before running brew so that brew doesn't find conda packages in your PATH whenever it tries to install something. In fact, brew doctor will complain if you have not deactivated conda before running brew, as mentioned in the post I link to above. (See also this question.).

Brew Conda Not Found

may need ` brew unlink python@3.8` before using conda pip install...

Generally want to search for software in brew first. And if brew does not have it, then conda search, and finally pip search. Brew is nice enough to suggest taps, but conda does not (yet) suggest channels like bioconda. So, for science work, here is one possible way to setup your macos and/or linux computer.

Example 1. Do install with python@3.8 provided by brew

$ brew unlink python@3.8$ conda config --add channels conda-forge$ conda config --add channels bioconda # actually not needed I think$ which pip # should be miniconda's pip(base) $ $ conda activate(base) $ $ conda install numpy(base) $ $ pip install pytc-gui

The Homebrew package manager may be used on Linux and Windows Subsystem for Linux (WSL). Homebrew was formerly referred to as Linuxbrew when running on Linux or WSL. It can be installed in your home directory, in which case it does not use sudo. Homebrew does not use any libraries provided by your host system, except glibc and gcc if they are new enough. Homebrew can install its own current versions of glibc and gcc for older distributions of Linux.

Features, installation instructions and requirements are described below. Terminology (e.g. the difference between a Cellar, Tap, Cask and so forth) is explained in the documentation.

Features

• Can install software to your home directory and so does not require sudo
• Install software not packaged by your host distribution
• Install up-to-date versions of software when your host distribution is old
• Use the same package manager to manage your macOS, Linux, and Windows systems

Install

Instructions for a supported install of Homebrew on Linux are on the homepage.

Brew Miniconda

The installation script installs Homebrew to /home/linuxbrew/.linuxbrew using sudo if possible and in your home directory at ~/.linuxbrew otherwise. Homebrew does not use sudo after installation. Using /home/linuxbrew/.linuxbrew allows the use of more binary packages (bottles) than installing in your personal home directory.

The prefix /home/linuxbrew/.linuxbrew was chosen so that users without admin access can ask an admin to create a linuxbrew role account and still benefit from precompiled binaries. If you do not yourself have admin privileges, consider asking your admin staff to create a linuxbrew role account for you with home directory /home/linuxbrew.

Follow the Next steps instructions to add Homebrew to your PATH and to your bash shell profile script, either ~/.profile on Debian/Ubuntu or ~/.bash_profile on CentOS/Fedora/Red Hat.

You’re done! Try installing a package:

If you’re using an older distribution of Linux, installing your first package will also install a recent version of glibc and gcc. Use brew doctor to troubleshoot common issues.

Requirements

• GCC 4.7.0 or newer
• Linux 2.6.32 or newer
• Glibc 2.13 or newer
• 64-bit x86_64 CPU

Paste at a terminal prompt:

Debian or Ubuntu

Fedora, CentOS, or Red Hat

ARM

Homebrew can run on 32-bit ARM (Raspberry Pi and others) and 64-bit ARM (AArch64), but no binary packages (bottles) are available. Support for ARM is on a best-effort basis. Pull requests are welcome to improve the experience on ARM platforms.

You may need to install your own Ruby using your system package manager, a PPA, or rbenv/ruby-build as we no longer distribute a Homebrew Portable Ruby for ARM.

Mac Install Miniconda

32-bit x86

Homebrew does not currently support 32-bit x86 platforms. It would be possible for Homebrew to work on 32-bit x86 platforms with some effort. An interested and dedicated person could maintain a fork of Homebrew to develop support for 32-bit x86.

Alternative Installation

Extract or git clone Homebrew wherever you want. Use /home/linuxbrew/.linuxbrew if possible (to enable the use of binary packages).

Homebrew on Linux Community